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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
20
ATAC-seq
6
total RNA-seq
5
pCHi-C
4
WGBS
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
78
DNA binding
Target of assay
44
histone
44
histone modification
34
control
28
broad histone mark
16
narrow histone mark
Date released
56
August, 2017
18
October, 2018
3
June, 2019
1
October, 2019
Available data
27
bam
24
fastq
22
tagAlign
1
bed broadPeak
1
bed narrowPeak
1
bigWig
Organism
78
Homo sapiens
Biosample type
56
tissue
19
in vitro differentiated cells
3
primary cell
Organ
192
liver
78
connective tissue
61
pancreas
55
adipose tissue
47
brain
32
epithelium
27
vasculature
26
blood vessel
26
musculature of body
21
heart
19
limb
13
kidney
11
nerve
9
artery
8
spleen
7
embryo
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
78
AMP
Genome assembly (visualization)
76
hg19
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
1
islet of Langerhans
1
in vitro differentiated cells
adipocyte
19
primary cell
cardiac fibroblast
2
mesenchymal stem cell
1
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