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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
ChIP-seq
Assay category
3
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
2
August, 2021
1
August, 2017
1
February, 2023
Available data
28
bam
26
fastq
22
tagAlign
8
bed bed3+
8
bigWig
5
bed bed3
4
bed bedgraph
4
bed narrowPeak
4
tsv
3
bigBed narrowPeak
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
hdf5
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
Organ
74
liver
27
eye
26
pancreas
14
musculature of body
13
epithelium
4
connective tissue
2
adipose tissue
2
brain
1
blood vessel
1
heart
1
kidney
1
limb
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
74
hg19
GRCh38
Lab
2
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
assembly!
GRCh38
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
in vitro differentiated cells
adipocyte
1
osteoblast
1
tissue
adipose tissue
1
subcutaneous abdominal adipose tissue
1
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