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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
Hi-C
1
RRBS
Assay category
1
3D chromatin structure
1
DNA methylation
Target of assay
control
Date released
2
July, 2019
1
February, 2021
1
May, 2021
Available data
2
bed bed3+
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
hdf5
Organism
4
Homo sapiens
Biosample type
43
tissue
36
in vitro differentiated cells
4
primary cell
1
stem cell
Organ
160
epithelium
142
pancreas
11
vasculature
10
blood vessel
8
blood
8
bodily fluid
8
vein
5
kidney
4
brain
4
connective tissue
2
liver
1
bone element
1
bone marrow
1
eye
1
heart
1
musculature of body
Project
3
AMP
1
T1D
Genome assembly (visualization)
34
hg19
GRCh38
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
target.investigated_as!
control
BIOSAMPLE
ASSAY
4 results
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pCHi-C
Hi-C
RRBS
primary cell
adult endothelial progenitor cell
1
brain pericyte
1
cardiac fibroblast
1
osteoblast
1
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