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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
41
histone
41
histone modification
27
control
24
broad histone mark
18
transcription factor
17
narrow histone mark
6
RNA binding protein
Date released
12
August, 2017
5
October, 2018
1
June, 2019
Available data
18
bam
18
bigWig
17
fastq
6
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
Organism
18
Homo sapiens
Biosample type
in vitro differentiated cells
17
tissue
1
primary cell
Organ
336
liver
51
blood
51
bodily fluid
18
connective tissue
18
pancreas
17
adipose tissue
12
heart
10
kidney
9
vasculature
8
blood vessel
6
epithelium
6
spleen
5
artery
3
brain
1
eye
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
12
missing controlled_by
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
primary cell
cardiac fibroblast
1
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