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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
ATAC-seq
2
DNase-seq
2
WGBS
Assay category
7
DNA binding
6
DNA accessibility
2
DNA methylation
Target of assay
5
RNA binding protein
5
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
5
August, 2017
5
October, 2018
1
February, 2023
1
June, 2019
1
November, 2018
1
November, 2019
1
October, 2017
Available data
498
bam
481
bigWig
457
tsv
43
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
15
Homo sapiens
Biosample type
45
in vitro differentiated cells
18
primary cell
15
tissue
Organ
193
brain
180
heart
154
kidney
129
pancreas
114
liver
101
blood vessel
101
vasculature
93
limb
62
artery
54
musculature of body
30
eye
27
nerve
18
ureter
16
spleen
15
adipose tissue
15
connective tissue
12
epithelium
8
bone element
8
skeleton
1
pericardium
1
pituitary gland
Project
15
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
ATAC-seq
DNase-seq
WGBS
tissue
omental fat pad
3
1
2
adipose tissue
1
1
2
subcutaneous adipose tissue
2
1
adipose tissue(adipose white tissue)
1
subcutaneous abdominal adipose tissue
1
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