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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
43
ATAC-seq
29
DNase-seq
Assay category
114
DNA binding
72
DNA accessibility
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
17
transcription factor
15
RNA binding protein
Date released
47
April, 2019
40
May, 2024
36
February, 2023
28
June, 2019
15
May, 2019
5
October, 2018
5
October, 2019
4
July, 2019
3
August, 2017
1
November, 2018
1
November, 2019
1
October, 2017
Available data
638
bigWig
630
bam
568
tsv
186
bed narrowPeak
98
bigBed narrowPeak
43
fastq
33
bed bed3+
30
bed broadPeak
29
bigBed broadPeak
9
bed bedMethyl
9
bigBed bedMethyl
8
tagAlign
3
bedpe bed3+
3
hic
Organism
186
Homo sapiens
Biosample type
186
tissue
45
in vitro differentiated cells
17
primary cell
12
cell line
Organ
192
brain
173
heart
153
kidney
123
pancreas
113
liver
100
blood vessel
100
vasculature
92
limb
62
artery
51
musculature of body
30
eye
27
nerve
18
ureter
14
spleen
13
adipose tissue
13
connective tissue
12
epithelium
8
bone element
8
skeleton
1
pituitary gland
Project
186
AMP
Genome assembly (visualization)
183
GRCh38
109
hg19
Lab
146
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
186 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
29
2
3
heart
12
18
heart right ventricle
11
1
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