Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
WGBS
3
ATAC-seq
3
total RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
5
DNA binding
4
DNA methylation
3
DNA accessibility
3
Transcription
Target of assay
histone
32
histone modification
20
broad histone mark
12
narrow histone mark
5
control
Date released
9
August, 2017
2
February, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
October, 2019
Available data
bam
479
bigWig
457
tsv
42
fastq
11
bed narrowPeak
9
bigBed narrowPeak
6
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
tagAlign
Organism
16
Homo sapiens
Biosample type
26
in vitro differentiated cells
17
tissue
3
primary cell
1
stem cell
Organ
201
kidney
145
heart
92
bone element
62
pancreas
53
liver
51
eye
46
blood vessel
46
vasculature
39
artery
20
lung
19
musculature of body
18
brain
17
adipose tissue
17
connective tissue
15
epithelium
8
skeleton
7
limb
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
nerve
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
17
AMP-T2D consortium
target.investigated_as!
histone
files.file_type!
bam
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
total RNA-seq
RNA microarray
pCHi-C
tissue
subcutaneous abdominal adipose tissue
5
3
adipose tissue
1
3
1
1
subcutaneous adipose tissue
1
1
omental fat pad
1
Download