Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
4
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
117
DNA binding
4
DNA methylation
2
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
34
transcription factor
28
narrow histone mark
14
control
4
RNA binding protein
2
chromatin remodeller
Date released
455
February, 2021
123
August, 2017
23
October, 2018
18
June, 2019
17
July, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
72
fastq
71
bam
65
bigWig
46
bed narrowPeak
22
tagAlign
11
bed bed3+
3
bigBed narrowPeak
2
bed bedMethyl
2
bed broadPeak
bigBed bedMethyl
1
bigBed broadPeak
Organism
123
Homo sapiens
Biosample type
68
in vitro differentiated cells
55
tissue
Organ
188
pancreas
123
connective tissue
55
adipose tissue
53
liver
29
epithelium
24
musculature of body
Project
123
AMP
Genome assembly (visualization)
64
hg19
63
GRCh38
Lab
123
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
123 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
67
1
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
adipose tissue
2
1
subcutaneous adipose tissue
1
Download