Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
797
total RNA-seq
300
ChIP-seq
80
single cell RNA-seq
70
ATAC-seq
17
DNase-seq
6
WGBS
5
small RNA-seq
2
FAIRE-seq
1
pCHi-C
Assay category
797
Transcription
Date released
475
February, 2021
116
July, 2018
89
August, 2017
41
May, 2021
26
September, 2018
20
November, 2019
15
July, 2019
6
May, 2022
4
November, 2020
3
March, 2020
2
October, 2018
Available data
797
bam
795
tsv
791
bigWig
178
fastq
6
txt
Organism
797
Homo sapiens
Biosample type
721
tissue
38
primary cell
33
cell line
5
in vitro differentiated cells
Organ
467
connective tissue
395
adipose tissue
330
pancreas
159
liver
76
epithelium
69
heart
58
blood vessel
58
bone element
58
vasculature
54
artery
14
embryo
11
kidney
5
brain
4
limb
4
musculature of body
4
nerve
1
pericardium
Project
795
AMP
2
T1D
Genome assembly (visualization)
791
GRCh38
791
hg19
Lab
791
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
33
inconsistent ontology term
BIOSAMPLE
ASSAY
797 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
tissue
adipose tissue
381
islet of Langerhans
266
bone tissue
58
subcutaneous adipose tissue
6
omental fat pad
4
+ See 3 more…
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
osteoblast
5
pancreatic acinar cell
4
pancreatic ductal cell
4
+ See 5 more…
cell line
EndoC_BH1
33
in vitro differentiated cells
adipocyte
4
cardiac fibroblast
1
See all biosamples
Download