Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
3
small RNA-seq
1
Hi-C
1
RRBS
1
pCHi-C
Assay category
17
Transcription
1
3D chromatin structure
1
DNA methylation
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
18
bigWig
17
bam
17
tsv
1
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
20
Homo sapiens
Biosample type
10
tissue
9
primary cell
1
in vitro differentiated cells
Organ
67
pancreas
39
epithelium
28
heart
20
connective tissue
18
brain
12
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
5
limb
3
artery
2
embryo
2
pericardium
1
bone element
1
bone marrow
1
eye
1
thymus
Project
19
AMP
1
T1D
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
19
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
Hi-C
RRBS
pCHi-C
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
primary cell
mesenchymal stem cell of adipose
1
1
adult endothelial progenitor cell
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
+ See 3 more…
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
Download