Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
9
DNase-seq
4
ATAC-seq
Assay category
13
DNA accessibility
11
DNA binding
Target of assay
9
histone
9
histone modification
6
RNA binding protein
6
transcription factor
5
narrow histone mark
broad histone mark
Date released
11
June, 2019
5
October, 2018
3
August, 2017
3
October, 2019
1
November, 2018
1
November, 2020
Available data
577
bam
554
bigWig
478
tsv
89
fastq
59
bed narrowPeak
27
bed bed3+
24
bigBed narrowPeak
10
bed broadPeak
10
tagAlign
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
24
Homo sapiens
Biosample type
11
primary cell
10
tissue
3
in vitro differentiated cells
Organ
337
liver
92
kidney
69
brain
62
epithelium
61
pancreas
60
heart
blood
54
bodily fluid
50
limb
42
vasculature
39
musculature of body
38
blood vessel
24
connective tissue
18
ureter
11
artery
10
adipose tissue
10
nerve
9
spleen
8
vein
6
eye
Project
24
AMP
Genome assembly (visualization)
23
hg19
21
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
blood
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
2
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
3
2
subcutaneous adipose tissue
2
1
adipose tissue
1
1
in vitro differentiated cells
adipocyte
1
2
Download