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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
40
DNA binding
Target of assay
78
histone
78
histone modification
44
broad histone mark
40
transcription factor
35
control
33
narrow histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
34
August, 2017
5
October, 2018
1
June, 2019
Available data
40
bam
40
bigWig
39
fastq
23
bed narrowPeak
10
bed bed3+
6
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
22
in vitro differentiated cells
17
tissue
1
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
eye
Project
40
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
40
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
organ_slims!
eye
month_released!
July, 2018
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
in vitro differentiated cells
adipocyte
22
tissue
white adipose tissue
12
omental fat pad
3
subcutaneous adipose tissue
2
primary cell
cardiac fibroblast
1
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