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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
3
Hi-C
2
Capture-C
Assay category
4
DNA accessibility
3
3D chromatin structure
Date released
4
February, 2023
3
July, 2019
2
August, 2021
Available data
bam
720
bigWig
546
tsv
204
bed narrowPeak
107
bigBed narrowPeak
104
fastq
38
bed bed3+
28
tagAlign
23
bed broadPeak
22
bigBed broadPeak
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
3
bedpe bed3+
3
hdf5
3
hic
1
tar
Organism
9
Homo sapiens
Biosample type
6
in vitro differentiated cells
3
primary cell
Organ
7
connective tissue
3
brain
2
blood vessel
2
epithelium
2
liver
2
vasculature
1
musculature of body
1
pancreas
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
7
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
9 results
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Clear Filters
ATAC-seq
Hi-C
Capture-C
in vitro differentiated cells
adipocyte
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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