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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
449
total RNA-seq
5
ATAC-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
451
Transcription
5
DNA accessibility
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
3
March, 2020
2
April, 2018
2
February, 2020
2
July, 2018
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
453
bam
452
bigWig
451
tsv
4
bed bedgraph
2
fastq
1
bed bed3
1
bed bed3+
1
bed narrowPeak
Organism
457
Homo sapiens
Biosample type
444
tissue
8
in vitro differentiated cells
5
primary cell
Organ
457
connective tissue
386
adipose tissue
189
pancreas
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
65
epithelium
8
kidney
8
skeleton
6
limb
3
liver
0
esophagus
Project
457
AMP
Genome assembly (visualization)
457
hg19
452
GRCh38
Lab
457
AMP-T2D consortium
BIOSAMPLE
ASSAY
457 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
in vitro differentiated cells
adipocyte
4
4
primary cell
osteoblast
1
1
1
pancreatic stellate cell
2
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