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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
DNase-seq
1
ChIP-seq
Assay category
87
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
84
June, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
737
bam
701
bigWig
502
tsv
258
bed narrowPeak
132
bigBed narrowPeak
105
bed bed3+
101
fastq
88
bed broadPeak
87
bigBed broadPeak
64
xls
62
txt
22
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
6
bed bed3
5
csv
4
bed bedgraph
1
bedpe bed3+
1
hdf5
1
hic
Organism
88
Homo sapiens
Biosample type
71
tissue
16
primary cell
1
in vitro differentiated cells
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
88
AMP
Genome assembly (visualization)
87
GRCh38
80
hg19
Lab
88
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
88 results
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DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 6 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain pericyte
1
epithelial cell of proximal tubule
1
+ See 7 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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