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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
Assay category
86
DNA binding
Target of assay
378
transcription factor
181
histone modification
180
histone
143
control
93
narrow histone mark
86
broad histone mark
82
recombinant protein
68
RNA binding protein
25
chromatin remodeller
2
other context
2
other post-translational modification
Date released
59
August, 2017
10
December, 2017
8
November, 2017
4
June, 2019
3
October, 2019
2
August, 2021
Available data
46
bigWig
45
bam
45
bed narrowPeak
37
fastq
30
tagAlign
25
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
86
Homo sapiens
Biosample type
45
tissue
27
in vitro differentiated cells
9
cell line
5
primary cell
Organ
78
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
37
heart
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
86
AMP
Genome assembly (visualization)
46
hg19
44
GRCh38
Lab
85
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
right lobe of liver
3
in vitro differentiated cells
adipocyte
20
hepatocyte
7
cell line
HepG2
9
primary cell
mesenchymal stem cell
4
hepatocyte
1
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