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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
Assay category
11
DNA accessibility
Date released
6
June, 2019
2
October, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
635
bam
601
bigWig
483
tsv
102
bed narrowPeak
101
fastq
54
bigBed narrowPeak
29
bed bed3+
22
tagAlign
12
bed broadPeak
11
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
11
Homo sapiens
Biosample type
6
primary cell
4
tissue
1
in vitro differentiated cells
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
11 results
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DNase-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
tibial nerve
2
in vitro differentiated cells
adipocyte
1
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