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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
41
histone
41
histone modification
27
control
24
broad histone mark
18
transcription factor
17
narrow histone mark
6
RNA binding protein
Date released
38
August, 2017
18
October, 2018
11
June, 2019
1
October, 2019
Available data
31
bam
20
fastq
10
bed narrowPeak
10
bigWig
9
bigBed narrowPeak
8
tagAlign
1
bed broadPeak
Organism
68
Homo sapiens
Biosample type
57
tissue
in vitro differentiated cells
11
primary cell
Organ
218
brain
202
pancreas
197
liver
117
heart
104
epithelium
93
vasculature
91
blood vessel
68
connective tissue
66
limb
56
adipose tissue
42
kidney
39
musculature of body
35
nerve
29
artery
17
vein
14
spleen
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
68
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
2
islet of Langerhans
1
primary cell
mesenchymal stem cell
7
cardiac fibroblast
4
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