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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
ChIP-seq
Assay category
143
DNA binding
Target of assay
378
transcription factor
181
histone modification
180
histone
143
control
93
narrow histone mark
86
broad histone mark
82
recombinant protein
68
RNA binding protein
25
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
25
August, 2017
23
May, 2020
18
October, 2018
13
December, 2017
5
August, 2021
3
June, 2019
Available data
129
bam
102
fastq
31
tagAlign
13
bigWig
2
bed bed3+
Organism
143
Homo sapiens
Biosample type
70
tissue
60
cell line
9
in vitro differentiated cells
4
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
143
AMP
Genome assembly (visualization)
15
hg19
2
GRCh38
Lab
139
AMP-T2D consortium
4
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
143 results
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ChIP-seq
tissue
liver
43
subcutaneous adipose tissue
10
omental fat pad
8
subcutaneous abdominal adipose tissue
5
right lobe of liver
3
+ See 1 more…
cell line
HepG2
60
in vitro differentiated cells
adipocyte
8
hepatocyte
1
primary cell
cardiac fibroblast
2
hepatocyte
1
mesenchymal stem cell
1
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