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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
78
histone
78
histone modification
44
broad histone mark
40
transcription factor
35
control
33
narrow histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
73
August, 2017
9
June, 2019
5
October, 2018
1
October, 2019
Available data
45
bed narrowPeak
45
bigWig
44
bam
35
fastq
19
tagAlign
15
bigBed narrowPeak
1
bed broadPeak
Organism
88
Homo sapiens
Biosample type
41
in vitro differentiated cells
38
tissue
9
primary cell
Organ
190
brain
161
liver
160
pancreas
101
epithelium
88
connective tissue
76
vasculature
74
blood vessel
68
heart
49
limb
37
adipose tissue
33
kidney
33
musculature of body
24
nerve
21
artery
15
vein
12
embryo
11
blood
11
bodily fluid
6
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
88
AMP
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
in vitro differentiated cells
adipocyte
41
tissue
subcutaneous abdominal adipose tissue
31
omental fat pad
3
subcutaneous adipose tissue
2
adipose tissue
1
islet of Langerhans
1
primary cell
mesenchymal stem cell
6
cardiac fibroblast
3
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