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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
78
histone
78
histone modification
44
broad histone mark
40
transcription factor
35
control
33
narrow histone mark
10
RNA binding protein
2
chromatin remodeller
Date released
42
August, 2017
18
October, 2018
7
June, 2019
1
October, 2019
Available data
45
bam
38
fastq
18
bed narrowPeak
18
bigWig
10
tagAlign
5
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
Organism
68
Homo sapiens
Biosample type
37
tissue
24
in vitro differentiated cells
7
primary cell
Organ
168
liver
148
brain
126
pancreas
79
epithelium
68
connective tissue
48
vasculature
46
blood vessel
45
heart
36
adipose tissue
32
limb
27
kidney
19
musculature of body
19
nerve
15
artery
15
embryo
10
spleen
8
vein
7
blood
7
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
68
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
16
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
2
islet of Langerhans
1
in vitro differentiated cells
adipocyte
24
primary cell
cardiac fibroblast
4
mesenchymal stem cell
3
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