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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
4
Hi-C
3
total RNA-seq
1
GRO-seq
Assay category
26
DNA binding
4
3D chromatin structure
3
Transcription
Target of assay
23
control
3
histone
3
histone modification
3
narrow histone mark
Date released
17
October, 2019
4
December, 2017
4
July, 2019
3
February, 2018
3
February, 2020
2
May, 2019
1
January, 2018
Available data
25
bam
8
fastq
3
tsv
2
bigWig
1
bed narrowPeak
1
bigBed narrowPeak
Organism
34
Homo sapiens
Biosample type
26
tissue
8
in vitro differentiated cells
Organ
311
pancreas
260
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
34
AMP
Genome assembly (visualization)
GRCh38
125
hg19
1
hg18
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
GRCh38
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
Hi-C
total RNA-seq
GRO-seq
tissue
tibial nerve
11
1
tibial artery
5
1
gastrocnemius medialis
4
1
muscle of leg
2
islet of Langerhans
1
in vitro differentiated cells
pancreatic endoderm
5
1
Hepatic endoderm
2
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