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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
total RNA-seq
6
ChIP-seq
1
GRO-seq
Assay category
12
Transcription
6
DNA binding
Target of assay
5
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
3
December, 2017
1
January, 2018
Available data
30
bam
25
bigWig
23
fastq
bed narrowPeak
12
tsv
3
bed bed3+
Organism
19
Homo sapiens
Biosample type
11
in vitro differentiated cells
8
cell line
Organ
665
pancreas
601
connective tissue
478
adipose tissue
350
liver
304
epithelium
200
heart
160
kidney
103
vasculature
101
blood vessel
82
brain
67
artery
67
bone element
35
musculature of body
30
limb
28
eye
20
lung
19
embryo
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
19
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
1
hg18
Lab
19
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
1
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
19 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
cell line
H1-hESC
8
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