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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
14
histone
14
histone modification
10
narrow histone mark
8
control
4
broad histone mark
4
transcription factor
1
RNA binding protein
Date released
6
February, 2018
5
December, 2017
2
October, 2019
1
June, 2019
Available data
12
bam
12
bed narrowPeak
12
bigWig
11
fastq
2
bed bed3+
1
bigBed narrowPeak
Organism
14
Homo sapiens
Biosample type
11
in vitro differentiated cells
2
tissue
1
primary cell
Organ
183
brain
103
pancreas
101
liver
97
heart
78
connective tissue
72
epithelium
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
11
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
14
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
14
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
2
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
in vitro differentiated cells
pancreatic endoderm
9
Hepatic endoderm
2
tissue
islet of Langerhans
2
primary cell
retinal pigment epithelial cell
1
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