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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
16
transcription factor
14
histone
14
histone modification
11
chromatin remodeller
7
broad histone mark
7
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
21
November, 2017
5
November, 2018
3
December, 2017
1
August, 2017
Available data
30
bam
30
bigWig
30
fastq
28
bed narrowPeak
25
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
1
bed bed3+
Organism
30
Homo sapiens
Biosample type
26
cell line
3
in vitro differentiated cells
1
tissue
Organ
27
liver
9
pancreas
6
connective tissue
5
epithelium
3
embryo
Project
30
AMP
Genome assembly (visualization)
30
hg19
26
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
30
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
cell line
HepG2
26
in vitro differentiated cells
pancreatic endoderm
2
Hepatic endoderm
1
tissue
liver
1
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