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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
12
total RNA-seq
Assay category
18
DNA binding
12
Transcription
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Date released
13
February, 2018
9
December, 2017
8
August, 2021
May, 2021
Available data
30
bam
24
bigWig
22
fastq
12
bed narrowPeak
12
tsv
3
bed bed3+
Organism
30
Homo sapiens
Biosample type
22
in vitro differentiated cells
8
cell line
Organ
885
pancreas
791
liver
682
connective tissue
epithelium
491
adipose tissue
390
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
158
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
34
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
hg18
Lab
30
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
month_released!
May, 2021
organ_slims!
epithelium
assembly!
hg18
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
18
4
cell line
H1-hESC
8
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