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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
total RNA-seq
9
ChIP-seq
1
GRO-seq
Assay category
12
Transcription
9
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
3
control
3
narrow histone mark
Date released
13
February, 2018
December, 2017
8
August, 2021
1
January, 2018
Available data
21
bam
19
bigWig
14
fastq
12
tsv
6
bed narrowPeak
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
cell line
Organ
865
pancreas
727
liver
665
connective tissue
adipose tissue
418
epithelium
387
heart
331
kidney
283
brain
235
vasculature
230
blood vessel
141
artery
121
limb
87
musculature of body
75
bone element
69
blood
69
bodily fluid
61
eye
43
nerve
25
spleen
22
embryo
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
Project
22
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
1
hg18
Lab
22
AMP-T2D consortium
Audit category:
inconsistent ontology term
organ_slims!
adipose tissue
month_released!
December, 2017
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
9
1
cell line
H1-hESC
8
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