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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
14
total RNA-seq
1
GRO-seq
Assay category
14
DNA binding
14
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
August, 2021
8
December, 2017
2
May, 2021
1
January, 2018
Available data
36
bam
29
bigWig
27
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
29
Homo sapiens
Biosample type
21
in vitro differentiated cells
8
cell line
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
29
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
1
hg18
Lab
29
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
organ_slims!
kidney
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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