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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
8
snATAC-seq
1
GRO-seq
Assay category
13
DNA binding
8
DNA accessibility
Target of assay
12
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
4
December, 2017
3
February, 2018
3
January, 2019
3
November, 2018
1
January, 2018
Available data
14
fastq
13
bam
1
bigWig
Organism
22
Homo sapiens
Biosample type
8
in vitro differentiated cells
8
primary cell
6
cell line
Organ
288
pancreas
225
kidney
213
epithelium
166
liver
165
heart
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
26
limb
23
musculature of body
20
lung
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
14
AMP
8
T1D
Genome assembly (visualization)
hg19
83
GRCh38
1
hg18
Lab
14
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
snATAC-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
5
1
Hepatic endoderm
2
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
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