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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
574
ChIP-seq
203
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
GRO-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
203
Transcription
Date released
143
May, 2020
20
May, 2022
17
August, 2021
5
December, 2019
5
January, 2019
4
February, 2018
4
July, 2019
2
May, 2021
1
February, 2020
1
March, 2020
1
October, 2019
Available data
183
tsv
173
bam
173
bigWig
9
fastq
Organism
203
Homo sapiens
Biosample type
170
tissue
22
cell line
6
in vitro differentiated cells
5
primary cell
Organ
474
connective tissue
403
pancreas
398
adipose tissue
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
203
AMP
Genome assembly (visualization)
173
GRCh38
173
hg19
Lab
174
AMP-T2D consortium
20
Karen Mohlke, UNC
9
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
203 results
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Clear Filters
total RNA-seq
tissue
liver
167
right lobe of liver
3
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
primary cell
hepatocyte
5
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