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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
37
DNA binding
6
Transcription
Target of assay
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
8
control
5
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
28
December, 2017
13
February, 2018
2
May, 2021
1
January, 2018
Available data
43
bam
42
fastq
35
bigWig
28
bed narrowPeak
14
bigBed narrowPeak
6
tsv
3
bed bed3+
Organism
44
Homo sapiens
Biosample type
409
cell line
361
tissue
44
in vitro differentiated cells
14
primary cell
Organ
97
connective tissue
29
embryo
24
epithelium
15
liver
3
pancreas
1
adipose tissue
1
heart
Project
44
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
1
hg18
Lab
44
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
44 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
4
1
hepatocyte
15
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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