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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
14
total RNA-seq
1
ATAC-seq
1
GRO-seq
Assay category
23
DNA binding
Target of assay
13
histone
13
histone modification
9
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
13
December, 2017
9
February, 2018
1
October, 2019
Available data
23
bam
22
fastq
15
bed narrowPeak
15
bigWig
3
bed bed3+
1
tagAlign
Organism
23
Homo sapiens
Biosample type
22
in vitro differentiated cells
1
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
23
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
23
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
in vitro differentiated cells
pancreatic endoderm
18
Hepatic endoderm
4
tissue
pituitary gland
1
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