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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
6
total RNA-seq
1
GRO-seq
Assay category
14
DNA binding
6
Transcription
Target of assay
12
histone
12
histone modification
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
December, 2017
2
May, 2021
1
January, 2018
Available data
20
bam
19
fastq
14
bigWig
7
bed narrowPeak
6
tsv
2
bed bed3+
Organism
21
Homo sapiens
Biosample type
21
in vitro differentiated cells
8
cell line
Organ
81
connective tissue
21
embryo
16
epithelium
10
liver
2
pancreas
1
adipose tissue
1
heart
Project
21
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
2
inconsistent control read length
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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