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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
ChIP-seq
Assay category
330
DNA binding
Target of assay
330
transcription factor
84
control
82
recombinant protein
57
RNA binding protein
57
histone modification
56
histone
29
broad histone mark
27
narrow histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
241
November, 2017
49
November, 2018
36
December, 2017
4
August, 2017
Available data
336
bigWig
332
bed narrowPeak
330
fastq
329
bam
314
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
330
Homo sapiens
Biosample type
286
cell line
39
tissue
5
in vitro differentiated cells
Organ
327
liver
51
blood
51
bodily fluid
39
connective tissue
17
adipose tissue
17
pancreas
6
spleen
4
epithelium
3
brain
3
embryo
2
vasculature
1
blood vessel
Project
330
AMP
Genome assembly (visualization)
321
hg19
289
GRCh38
Lab
330
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
16
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
330 results
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ChIP-seq
cell line
HepG2
286
tissue
liver
37
right lobe of liver
2
in vitro differentiated cells
pancreatic endoderm
3
hepatocyte
2
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