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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
72
DNA accessibility
55
Transcription
53
DNA methylation
32
DNA binding
8
3D chromatin structure
Target of assay
27
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
12
August, 2017
8
October, 2019
3
December, 2017
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
32
bam
17
fastq
4
bigWig
2
bed broadPeak
2
bigBed broadPeak
2
tagAlign
Organism
32
Homo sapiens
Biosample type
26
primary cell
4
in vitro differentiated cells
2
cell line
Organ
192
liver
78
connective tissue
61
pancreas
55
adipose tissue
47
brain
32
epithelium
27
vasculature
26
blood vessel
26
musculature of body
21
heart
19
limb
13
kidney
11
nerve
9
artery
8
spleen
7
embryo
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
32
AMP
Genome assembly (visualization)
101
hg19
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
7
pancreatic alpha cell
6
pancreatic beta cell
6
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 4 more…
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
cell line
EndoC_BH1
2
See all biosamples
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