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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
Assay category
97
DNA binding
54
DNA accessibility
Target of assay
88
histone
88
histone modification
48
narrow histone mark
40
broad histone mark
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
21
September, 2018
16
December, 2017
16
October, 2019
14
August, 2017
11
November, 2019
4
June, 2019
4
May, 2019
4
November, 2017
3
August, 2021
3
May, 2021
1
March, 2020
Available data
129
bam
101
bigWig
97
bed narrowPeak
72
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
97
Homo sapiens
Biosample type
66
primary cell
18
in vitro differentiated cells
13
cell line
Organ
413
liver
170
brain
140
pancreas
97
epithelium
75
vasculature
74
heart
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
Project
95
AMP
2
T1D
Genome assembly (visualization)
97
GRCh38
97
hg19
Lab
97
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
endothelial cell of umbilical vein
10
epithelial cell of proximal tubule
8
pancreatic acinar cell
8
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
pancreatic PP cell
2
cell line
EndoC_BH1
13
See all biosamples
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