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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
1
FAIRE-seq
Assay category
41
DNA methylation
40
DNA accessibility
Date released
80
May, 2022
1
October, 2019
Available data
317
bam
301
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
81
Homo sapiens
Biosample type
81
primary cell
Organ
81
epithelium
80
pancreas
3
liver
1
blood vessel
1
vasculature
1
vein
Project
80
HPAP
1
AMP
Genome assembly (visualization)
1
hg19
Lab
80
Klaus Kaestner, Upenn
1
AMP-T2D consortium
assay_title!
CRISPR genome editing followed by DNA sequencing
BIOSAMPLE
ASSAY
81 results
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WGBS
ATAC-seq
FAIRE-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
endothelial cell of umbilical vein
1
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