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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
25
ChIP-seq
20
ATAC-seq
6
MeRIP-seq
2
Capture-C
1
DNase-seq
1
Hi-C
1
RRBS
1
single cell RNA-seq
Assay category
25
DNA binding
Target of assay
16
histone
16
histone modification
10
narrow histone mark
6
broad histone mark
6
control
3
RNA binding protein
3
transcription factor
Date released
13
November, 2019
4
December, 2017
3
June, 2019
3
May, 2019
1
March, 2020
1
May, 2021
Available data
25
bam
19
bed narrowPeak
19
bigWig
4
bigBed narrowPeak
4
fastq
Organism
25
Homo sapiens
Biosample type
15
cell line
6
primary cell
4
in vitro differentiated cells
Organ
25
epithelium
16
kidney
15
pancreas
11
connective tissue
8
musculature of body
4
embryo
4
heart
2
brain
Project
23
AMP
2
T1D
Genome assembly (visualization)
19
GRCh38
19
hg19
Lab
25
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
cell line
EndoC_BH1
15
primary cell
epithelial cell of proximal tubule
3
kidney epithelial cell
3
in vitro differentiated cells
Hepatic endoderm
4
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