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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
total RNA-seq
110
ChIP-seq
102
ATAC-seq
70
single cell RNA-seq
47
WGBS
18
DNase-seq
7
Hi-C
6
MeRIP-seq
5
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
18
DNA accessibility
Date released
13
June, 2019
5
October, 2019
Available data
16
bam
16
bed narrowPeak
16
bigBed narrowPeak
16
bigWig
15
bed bed3+
15
bed broadPeak
15
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
17
primary cell
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
18
AMP
Genome assembly (visualization)
16
GRCh38
10
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
18 results
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DNase-seq
primary cell
kidney tubule cell
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
brain microvascular endothelial cell
1
+ See 7 more…
cell line
glomerular visceral epithelial cell
1
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