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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
8
Hi-C
6
MeRIP-seq
6
RRBS
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
47
DNA methylation
1
DNA accessibility
Date released
41
May, 2022
6
February, 2021
1
October, 2019
Available data
41
zippedFastqFolder
6
fastq
6
tsv
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tar
Organism
48
Homo sapiens
Biosample type
48
primary cell
Organ
53
pancreas
48
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
3
blood vessel
3
vasculature
2
spleen
1
brain
1
kidney
1
limb
1
musculature of body
1
vein
Project
47
HPAP
1
AMP
Genome assembly (visualization)
1
hg19
Lab
47
Klaus Kaestner, Upenn
1
AMP-T2D consortium
BIOSAMPLE
ASSAY
48 results
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WGBS
FAIRE-seq
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
endothelial cell of umbilical vein
1
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