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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
341
ChIP-seq
148
total RNA-seq
107
ATAC-seq
73
single cell RNA-seq
49
DNase-seq
47
WGBS
10
Hi-C
7
RRBS
6
MeRIP-seq
4
small RNA-seq
2
Capture-C
2
FAIRE-seq
2
pCHi-C
1
CRISPR genome editing followed by sgRNA sequencing
1
RNA microarray
Assay category
73
Transcription
Target of assay
3
control
Date released
33
April, 2018
33
July, 2018
3
August, 2018
3
July, 2019
1
June, 2018
Available data
73
bam
73
bigWig
73
tsv
66
fastq
Organism
73
Homo sapiens
Biosample type
73
primary cell
Organ
93
heart
74
pancreas
70
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Project
73
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
73
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
73 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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