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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
166
Transcription
52
DNA methylation
51
DNA accessibility
26
DNA binding
7
3D chromatin structure
Target of assay
21
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
12
August, 2017
8
October, 2019
2
November, 2017
1
August, 2021
1
December, 2017
1
June, 2019
1
May, 2021
Available data
104
bam
82
bigWig
bed narrowPeak
68
fastq
32
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
26
Homo sapiens
Biosample type
24
primary cell
2
in vitro differentiated cells
Organ
139
liver
93
connective tissue
76
pancreas
66
adipose tissue
48
brain
27
vasculature
26
blood vessel
26
epithelium
19
heart
18
limb
11
musculature of body
11
nerve
9
artery
8
kidney
8
spleen
7
vein
6
blood
6
bodily fluid
6
embryo
4
gonad
4
ovary
3
eye
1
lymph node
Project
26
AMP
Genome assembly (visualization)
4
hg19
Lab
26
AMP-T2D consortium
Audit category:
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bed narrowPeak
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
7
pancreatic alpha cell
6
pancreatic beta cell
6
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
1
pancreatic PP cell
1
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