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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
65
histone
65
histone modification
34
narrow histone mark
31
broad histone mark
20
control
4
transcription factor
3
RNA binding protein
Date released
21
October, 2019
21
September, 2018
14
August, 2017
December, 2017
3
August, 2021
2
May, 2019
2
November, 2017
1
June, 2019
1
May, 2021
Available data
65
bam
62
bigWig
60
bed narrowPeak
37
fastq
15
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
65
Homo sapiens
Biosample type
64
primary cell
1
in vitro differentiated cells
Organ
185
brain
139
pancreas
95
heart
85
liver
71
vasculature
70
blood vessel
70
connective tissue
65
epithelium
49
limb
32
adipose tissue
28
kidney
26
musculature of body
24
nerve
20
artery
15
vein
6
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
65
AMP
Genome assembly (visualization)
62
hg19
60
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
4
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
month_released!
December, 2017
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
+ See 6 more…
in vitro differentiated cells
pancreatic PP cell
1
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