Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
6
ChIP-seq
6
MeRIP-seq
2
Capture-C
1
Hi-C
1
RRBS
Assay category
18
DNA accessibility
6
DNA binding
1
3D chromatin structure
1
DNA methylation
Target of assay
9
control
3
nucleotide modification
Date released
16
May, 2021
6
November, 2020
4
November, 2019
2
August, 2021
2
December, 2017
1
July, 2019
1
June, 2019
1
May, 2019
1
October, 2019
Available data
63
bam
bigWig
36
tsv
22
bed narrowPeak
5
bigBed narrowPeak
5
fastq
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
bigBed broadPeak
1
hic
Organism
34
Homo sapiens
Biosample type
28
cell line
4
primary cell
2
in vitro differentiated cells
Organ
84
bone element
34
epithelium
28
pancreas
9
connective tissue
8
kidney
2
embryo
2
heart
1
adipose tissue
1
brain
1
liver
1
musculature of body
1
stomach
1
urinary bladder
Project
34
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
28
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
34
inconsistent ontology term
5
audit script error
files.file_type!
bigWig
BIOSAMPLE
ASSAY
34 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
MeRIP-seq
Capture-C
Hi-C
RRBS
cell line
EndoC_BH1
17
2
6
2
1
primary cell
epithelial cell of proximal tubule
1
1
Liver fetal (hepatocyte)
1
kidney epithelial cell
1
in vitro differentiated cells
Hepatic endoderm
2
Download