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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
DNase-seq
2
total RNA-seq
1
Hi-C
Assay category
8
DNA binding
2
DNA accessibility
2
Transcription
1
3D chromatin structure
Target of assay
5
histone
5
histone modification
4
broad histone mark
3
control
1
narrow histone mark
Date released
80
May, 2022
39
February, 2023
33
April, 2018
33
July, 2018
26
September, 2018
19
September, 2020
13
July, 2019
13
October, 2019
12
August, 2017
7
August, 2020
6
December, 2019
6
February, 2021
3
August, 2018
3
December, 2017
3
May, 2021
3
October, 2022
2
June, 2019
2
November, 2017
2
October, 2018
1
August, 2021
1
June, 2018
1
March, 2020
1
May, 2019
Available data
30
bam
23
bigWig
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
tsv
1
hic
1
tar
Organism
13
Homo sapiens
Biosample type
13
primary cell
cell line
Organ
21
eye
21
limb
15
nerve
13
blood vessel
13
epithelium
13
vasculature
11
brain
8
vein
7
kidney
5
artery
4
connective tissue
4
gonad
4
ovary
3
heart
3
pancreas
1
adipose tissue
1
liver
1
lymph node
1
pituitary gland
1
skin of body
Project
13
AMP
Genome assembly (visualization)
5
hg19
2
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
audit script error
biosample_type!
cell line
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
Hi-C
primary cell
endothelial cell of umbilical vein
7
1
kidney glomerular epithelial cell
1
1
kidney tubule cell
1
1
epithelial cell of proximal tubule
1
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