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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
Assay category
8
DNA binding
Target of assay
81
histone
81
histone modification
43
narrow histone mark
38
broad histone mark
25
control
8
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
2
December, 2017
2
June, 2019
2
November, 2017
1
May, 2019
1
May, 2021
Available data
8
bam
8
bed narrowPeak
8
bigWig
7
bigBed narrowPeak
4
fastq
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
8
Homo sapiens
Biosample type
5
primary cell
3
in vitro differentiated cells
cell line
Organ
41
liver
40
connective tissue
18
pancreas
17
adipose tissue
13
heart
8
epithelium
6
spleen
5
vasculature
4
blood vessel
3
brain
3
embryo
3
kidney
1
artery
1
eye
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
bone element
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
2
pancreatic PP cell
1
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