Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
167
Transcription
114
DNA binding
103
DNA accessibility
53
DNA methylation
7
3D chromatin structure
Target of assay
81
histone
81
histone modification
43
narrow histone mark
38
broad histone mark
25
control
8
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
26
August, 2017
24
October, 2019
21
September, 2018
19
December, 2017
6
June, 2019
6
November, 2017
5
May, 2019
4
August, 2021
3
May, 2021
Available data
114
bam
88
bigWig
84
bed narrowPeak
72
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
114
Homo sapiens
Biosample type
92
primary cell
22
in vitro differentiated cells
cell line
Organ
218
brain
190
pancreas
174
liver
153
connective tissue
128
heart
114
epithelium
96
vasculature
93
blood vessel
73
adipose tissue
66
limb
42
kidney
39
musculature of body
35
nerve
28
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
114
AMP
Genome assembly (visualization)
88
hg19
84
GRCh38
Lab
114
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
biosample_type!
cell line
organ_slims!
esophagus
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
17
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic ductal cell
13
epithelial cell of proximal tubule
10
+ See 6 more…
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
pancreatic PP cell
3
See all biosamples
Download