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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
total RNA-seq
1
ATAC-seq
1
RNA microarray
Assay category
38
Transcription
1
DNA accessibility
Date released
26
February, 2021
6
May, 2021
3
March, 2020
2
February, 2023
1
December, 2019
1
November, 2019
1
October, 2019
Available data
75
bam
70
bigWig
45
bed narrowPeak
40
tsv
19
fastq
15
bigBed narrowPeak
3
tagAlign
1
bedpe bed3+
1
hic
Organism
40
Homo sapiens
Biosample type
primary cell
35
cell line
3
tissue
2
in vitro differentiated cells
Organ
463
connective tissue
399
adipose tissue
309
pancreas
169
liver
164
heart
66
blood vessel
66
vasculature
58
bone element
56
artery
40
epithelium
23
brain
18
kidney
14
embryo
7
limb
7
musculature of body
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
38
AMP
2
T1D
Genome assembly (visualization)
37
hg19
36
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
35
inconsistent ontology term
1
audit script error
biosample_type!
primary cell
BIOSAMPLE
ASSAY
40 results
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total RNA-seq
ATAC-seq
RNA microarray
cell line
EndoC_BH1
33
1
glomerular visceral epithelial cell
1
tissue
pigmented layer of retina
2
renal glomerulus
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
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