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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
27
histone
27
histone modification
14
narrow histone mark
13
broad histone mark
9
control
4
transcription factor
3
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
14
December, 2017
10
November, 2019
2
May, 2021
1
March, 2020
Available data
27
bam
27
bed narrowPeak
27
bigWig
14
fastq
12
bigBed narrowPeak
1
tagAlign
Organism
27
Homo sapiens
Biosample type
primary cell
15
in vitro differentiated cells
12
cell line
Organ
184
brain
100
liver
93
pancreas
70
connective tissue
60
heart
54
blood vessel
54
vasculature
49
limb
32
adipose tissue
27
epithelium
25
musculature of body
24
nerve
20
artery
20
kidney
12
embryo
6
spleen
4
gonad
4
ovary
2
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
25
AMP
2
T1D
Genome assembly (visualization)
27
GRCh38
27
hg19
Lab
27
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
1
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
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