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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
88
DNA binding
Target of assay
88
histone
88
histone modification
48
narrow histone mark
40
broad histone mark
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
21
September, 2018
16
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
88
bam
88
bed narrowPeak
88
bigWig
51
fastq
29
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
88
Homo sapiens
Biosample type
61
primary cell
15
in vitro differentiated cells
12
cell line
Organ
168
brain
136
pancreas
96
heart
88
epithelium
69
liver
66
vasculature
65
blood vessel
47
limb
34
connective tissue
30
kidney
24
nerve
20
artery
13
musculature of body
11
embryo
10
vein
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
86
AMP
2
T1D
Genome assembly (visualization)
90
hg19
88
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
endothelial cell of umbilical vein
10
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
See all biosamples
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